Information for 6-RCCGCTAGGG (Motif 11)

C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G
Reverse Opposite:
A G T C A T G C A G T C C G A T C G T A A T C G A G T C C T A G A C T G A G T C
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.742
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif215.5
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets52.1 +/- 29.1bp
Average Position of motif in Background44.4 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RCCGCTAGGG-------
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RCCGCTAGGG----------
GCCASCAGGGGGCGCYVNNG
 C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RCCGCTAGGG--
TGCCCTGAGGGCA
 A C G T C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

MYBL1/MA0776.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RCCGCTAGGG--
ACCGTTAACGGT
 C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G A C G T A C G T
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RCCGCTAGGG
ACCACTTGAA
 C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--RCCGCTAGGG--------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---RCCGCTAGGG----
ATAACCACTTGAAAATT
 A C G T A C G T A C G T C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G A C G T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-RCCGCTAGGG--
TGCCCTGAGGGCA
 A C G T C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RCCGCTAGGG--
TGCCCTNAGGGCA
 A C G T C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RCCGCTAGGG
AGCCAATCGG-
 A C G T C T A G A G T C A G T C C T A G T A G C A C G T C G T A C T A G T A C G C T A G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T