Information for 2-SCACGTGGYV (Motif 2)

T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
Reverse Opposite:
A C G T T C A G T A G C A G T C C T G A A G T C C T A G A G C T A C T G A T G C
p-value:1e-58
log p-value:-1.346e+02
Information Content per bp:1.666
Number of Target Sequences with motif198.0
Percentage of Target Sequences with motif22.40%
Number of Background Sequences with motif2733.6
Percentage of Background Sequences with motif5.92%
Average Position of motif in Targets49.4 +/- 24.1bp
Average Position of motif in Background50.2 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:SCACGTGGYV
CCACGTGGNN
 T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.97
Offset:-3
Orientation:reverse strand
Alignment:---SCACGTGGYV
NNACCACGTGGT-
 A C G T A C G T A C G T T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:SCACGTGGYV
-CACGTGNC-
 T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-SCACGTGGYV
NVCACGTG---
 A C G T T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:SCACGTGGYV
CCACGTGGNN
 T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

MAX/MA0058.3/Jaspar

Match Rank:6
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-SCACGTGGYV
ACCACGTGCT-
 A C G T T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:SCACGTGGYV
-CACGTGDC-
 T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T

MNT/MA0825.1/Jaspar

Match Rank:8
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-SCACGTGGYV
ACCACGTGCC-
 A C G T T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T

Npas2/MA0626.1/Jaspar

Match Rank:9
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-SCACGTGGYV
GGCACGTGTC-
 A C G T T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:SCACGTGGYV
-CACGTGGN-
 T A C G A G T C C T G A A G T C C T A G A G C T A C T G A T C G A G T C T G C A
A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T