Information for 7-CGCCCTCCAGCCA (Motif 7)

A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A
Reverse Opposite:
C G A T A T C G T A C G G T A C G A C T C A T G T A C G G T C A A C T G T A C G A T C G G T A C T A C G
p-value:1e-13
log p-value:-3.174e+01
Information Content per bp:1.747
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif113.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets53.1 +/- 23.4bp
Average Position of motif in Background49.8 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCCCTCCAGCCA
TGCCCTGAGGGCA
 A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCCCTCCAGCCA
TGCCCTGAGGGCA
 A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCCCTCCAGCCA
TGCCCNNAGGGCA
 A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCTCCAGCCA
GCCMCGCCCMCY-----
 A C G T A C G T A C G T A C G T A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCTCCAGCCA
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGCCCTCCAGCCA-
--GCCTCAGGGCAT
 A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGCCCTCCAGCCA-
--SCCTSAGGSCAW
 A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCCCTCCAGCCA
-TGCCCCCGGGCA
 A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CGCCCTCCAGCCA-
------BCAGACWA
 A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGCCCTCCAGCCA
--NNTTCCCGCCC
 A G T C A C T G A T G C A T G C G T A C C A G T A T G C G T A C C T G A A C T G A G T C A T G C G C T A
A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C