Information for 12-GTGCCAACAG (Motif 18)

A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G C G A T C G A T A C T G C T A G A G T C C G T A T A G C
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.836
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif115.8
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets61.8 +/- 23.5bp
Average Position of motif in Background50.4 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GTGCCAACAG
GGTGCCAAGT-
 A C G T A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTGCCAACAG
ATGCCAACC-
 A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTGCCAACAG
CGTGCCAAG--
 A C G T A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTGCCAACAG
-TGCCAA---
 A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTGCCAACAG
TTGCCAAG--
 A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTGCCAACAG---
ACTATGCCAACCTACC
 A C G T A C G T A C G T A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GTGCCAACAG-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTGCCAACAG
ATGCCCACC-
 A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTGCCAACAG
--GTAAACAG
 A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTGCCAACAG
CTGCCCGCA-
 A T C G G C A T A C T G G A T C G T A C C G T A G C T A T A G C C G T A A C T G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T