Information for 5-CCTGGCVGGCTGGGAC (Motif 13)

A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G C G A T G T A C A G T C A G T C C G T A C T A G G T A C A G T C A C T G A C T G A G T C A G T C C G T A A T C G A C T G
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.826
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 19.4bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCTGGCVGGCTGGGAC
-----CTGTCTGG---
 A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTGGCVGGCTGGGAC
GTCATGCHTGRCTGS---
 A C G T A C G T A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTGGCVGGCTGGGAC
-CTGGCAGNCTGCCA-
 A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCTGGCVGGCTGGGAC
---VBSYGTCTGG---
 A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCTGGCVGGCTGGGAC---
---NGTAGGTTGGCATNNN
 A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCTGGCVGGCTGGGAC--
---RGSMTBCTGGGAAAT
 A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCTGGCVGGCTGGGAC
GGGGCTYGKCTGGGA-
 A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CCTGGCVGGCTGGGAC
------GGTCTGGCAT
 A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CCTGGCVGGCTGGGAC
-------GGTTGGCAT
 A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGGCVGGCTGGGAC
RYHYACCTGB-----------
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C G T A C T G T C A G G T A C T A G C C T A G A C T G A G T C C G A T A C T G A C T G A C T G C G T A A G T C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T