Information for 13-TTCMRCWCCYTGG (Motif 23)

A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C T G A A C T G A C T G C G A T A C T G A G T C A C G T A C T G C G T A C G T A
p-value:1e-7
log p-value:-1.658e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 27.0bp
Average Position of motif in Background23.0 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTCMRCWCCYTGG--------
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTCMRCWCCYTGG--------
-TCAGCACCATGGACAGCTCC
 A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTCMRCWCCYTGG-
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCMRCWCCYTGG
TTCCTCT------
 A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G
C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCMRCWCCYTGG
TTTCACACCTN--
 A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTCMRCWCCYTGG
TTTCACACCT---
 A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCMRCWCCYTGG
NTTTTCACACCTT--
 A C G T A C G T A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTCMRCWCCYTGG
-TTMACACCTT--
 A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTCMRCWCCYTGG
-TTCACACCTT--
 A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TTCMRCWCCYTGG
SCTGTCARCACC----
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C T A G A G T C C G T A A G T C A G T C A G C T A C G T A C T G A C T G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T