Information for 3-NRTGAGTCAS (Motif 3)

A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C
Reverse Opposite:
T A C G A C G T A C T G C G T A T A G C A C G T A G T C C G T A A G C T T A G C
p-value:1e-41
log p-value:-9.456e+01
Information Content per bp:1.770
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif9.40%
Number of Background Sequences with motif627.0
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets52.7 +/- 23.4bp
Average Position of motif in Background49.5 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:NRTGAGTCAS
GATGAGTCAT
 A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

FOS/MA0476.1/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:NRTGAGTCAS-
NATGAGTCANN
 A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C A C G T
T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-NRTGAGTCAS-
NNATGAGTCATN
 A C G T A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NRTGAGTCAS--
NATGASTCABNN
 A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C A C G T A C G T
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:5
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-NRTGAGTCAS-
NDATGASTCATH
 A C G T A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C A C G T
C A T G C T A G T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A G C T G A T C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:6
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NRTGAGTCAS
RATGASTCAT
 A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C
C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T

FOSL1/MA0477.1/Jaspar

Match Rank:7
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NRTGAGTCAS-
NATGAGTCACC
 A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C A C G T
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NRTGAGTCAS
DATGASTCAT
 A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C
C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-NRTGAGTCAS
GGATGACTCAT
 A C G T A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

JUNB/MA0490.1/Jaspar

Match Rank:10
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-NRTGAGTCAS
GGATGACTCAT
 A C G T A T C G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A T G C
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T