Information for 2-HKSTGATTGGYYR (Motif 2)

G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G
Reverse Opposite:
A G T C T C G A C T A G A G T C A G T C C T G A C G T A A G C T A T G C T C G A A T C G T G C A C A T G
p-value:1e-66
log p-value:-1.520e+02
Information Content per bp:1.657
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif13.75%
Number of Background Sequences with motif809.7
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets52.0 +/- 22.7bp
Average Position of motif in Background50.0 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:HKSTGATTGGYYR----
--CTGATTGGTCNATTT
 G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:HKSTGATTGGYYR
--CCGATTGGCT-
 G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.91
Offset:3
Orientation:reverse strand
Alignment:HKSTGATTGGYYR--
---TGATTGGCTANN
 G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----HKSTGATTGGYYR-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:HKSTGATTGGYYR
--TTGATTGN---
 G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:HKSTGATTGGYYR
CNGTGATTTN---
 G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---HKSTGATTGGYYR-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

EN2/MA0642.1/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:HKSTGATTGGYYR
-GNTAATTGGN--
 G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G
A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.70
Offset:6
Orientation:forward strand
Alignment:HKSTGATTGGYYR
------TTGGCA-
 G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

MSX2/MA0708.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:HKSTGATTGGYYR
--NTAATTGG---
 G A T C A C G T T A G C A G C T T A C G C T G A A C G T A G C T A C T G A C T G G A T C A G C T T C A G
A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T