Information for 12-GAGCCTGTAG (Motif 17)

A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G
Reverse Opposite:
A G T C A C G T G T C A A G T C C G T A C T A G T A C G A G T C A G C T G T A C
p-value:1e-6
log p-value:-1.553e+01
Information Content per bp:1.819
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif324.6
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets54.3 +/- 27.5bp
Average Position of motif in Background51.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAGCCTGTAG--
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGCCTGTAG
---GCTGTG-
 A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGCCTGTAG
TWGTCTGV--
 A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGCCTGTAG
CAGCC-----
 A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAGCCTGTAG-----------
-NNCCTGNAAAAAAAAAAAAA
 A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:-12
Orientation:forward strand
Alignment:------------GAGCCTGTAG
GAGCCTGGTACTGWGCCTGR--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGCCTGTAG-----
AGGACGCTGTAAAGGGA
 A C G T A C G T A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGCCTGTAG
AAGCTTG---
 A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAGCCTGTAG-----------
-NNCCTGNAAAAAAAAAAAAA
 A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCTGTAG
CGGAGC------
 A C G T A C G T A C T G C T G A T C A G A T G C A G T C A C G T A C T G C A G T C G T A C T A G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T