Information for 11-CCTGCGTATT (Motif 15)

G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T
Reverse Opposite:
C T G A T C G A C A G T G T C A T A G C A T C G A T G C C G T A C T A G C A T G
p-value:1e-8
log p-value:-1.939e+01
Information Content per bp:1.651
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.11%
Number of Background Sequences with motif612.2
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets46.4 +/- 25.2bp
Average Position of motif in Background51.7 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCGTATT-----
TNNTTTCGTATTNNANN
 A C G T A C G T G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTGCGTATT--
NNTGTGGATTSS
 G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCTGCGTATT---
--TGTGGATTNNN
 G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTGCGTATT
GCTGTG----
 G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCTGCGTATT-
-ATGAATATTC
 G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T A C G T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCGTATT---
CTCATGAATATTCAT
 A C G T A C G T G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T A C G T A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGCGTATT
RYHYACCTGB-----
 A C G T A C G T A C G T A C G T A C G T G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCTGCGTATT
NNCACCTGNN----
 A C G T A C G T A C G T A C G T G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTGCGTATT-
-ATGMATATDC
 G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCTGCGTATT---
---GNGGATTAGN
 G T A C G A T C C G A T T A C G T A G C A T C G C A G T G T C A A G C T G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G