Information for 11-WCATGWCTGTYAS (Motif 14)

C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T C T A G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A C G T A C T G C G A T
p-value:1e-9
log p-value:-2.250e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.7 +/- 11.7bp
Average Position of motif in Background60.1 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:WCATGWCTGTYAS--
---TGTCTGDCACCT
 C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:WCATGWCTGTYAS--
--CTGTCTGTCACCT
 C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:WCATGWCTGTYAS-
----VGCTGWCAVB
 C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:WCATGWCTGTYAS
------NTGTCAN
 C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:WCATGWCTGTYAS
-----GCTGTCAA
 C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:WCATGWCTGTYAS
-----CCTGTCAA
 C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:WCATGWCTGTYAS-
--BTGABTGACAGS
 C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:WCATGWCTGTYAS
-CATGAC------
 C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----WCATGWCTGTYAS
NNTNTCATGAATGT---
 A C G T A C G T A C G T A C G T C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:WCATGWCTGTYAS-
------YTGWCADY
 C G T A G T A C G T C A A C G T A C T G C G A T A G T C A C G T A C T G A C G T A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C