Information for 6-KTTTMWAGCCCTM (Motif 6)

A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
Reverse Opposite:
A C G T C G T A A C T G A C T G C T A G A G T C A C G T C G A T A C G T G T C A C G T A C G T A G T C A
p-value:1e-12
log p-value:-2.974e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 22.5bp
Average Position of motif in Background15.4 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--KTTTMWAGCCCTM
CCTTTTATAGNC---
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---KTTTMWAGCCCTM
NAATTTTATTACCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:KTTTMWAGCCCTM
-TTTGAAACCG--
 A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:KTTTMWAGCCCTM
GGTTAGAGACCT-
 A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:KTTTMWAGCCCTM
TTTTATGGCTN--
 A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KTTTMWAGCCCTM
TTTAATTGCN---
 A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---KTTTMWAGCCCTM
NAATTTTATTACCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----KTTTMWAGCCCTM
NGANTTTTATGGCTCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--KTTTMWAGCCCTM
DGWTTTATGRCN---
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:KTTTMWAGCCCTM
----CNAGGCCT-
 A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C T G A G T C A G T C A G T C A C G T G T C A
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T