Information for 18-AAGTGCGTCCCCG (Motif 27)

C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C C G T A A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.586e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 17.5bp
Average Position of motif in Background33.5 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:AAGTGCGTCCCCG
-------TCCCCA
 C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAGTGCGTCCCCG-
--CAACGTCCGCGG
 C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G A C G T
A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCGTCCCCG
TTAAGTGC-------
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCGTCCCCG
TTAAGTGCTT-----
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCGTCCCCG
NTCAAGTGGN------
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCGTCCCCG
NTCAAGTGG-------
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAGTGCGTCCCCG
--GTGGGCCCCA-
 C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G
A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCGTCCCCG
TTAAGTGGN------
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGTGCGTCCCCG
TTRAGTGSYK-----
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGTGCGTCCCCG
-KGCCCTTCCCCA
 C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C A G T C A G T C A C T G
A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A