Information for 4-SCTCAGAAGGTAGCGC (Motif 22)

T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C
Reverse Opposite:
A T C G G T A C T A C G A G T C A G C T G T C A G T A C A G T C A C G T A G C T A G T C G C A T T A C G C T G A A C T G A T G C
p-value:1e-8
log p-value:-2.057e+01
Information Content per bp:1.695
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif29.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.5 +/- 29.3bp
Average Position of motif in Background51.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:SCTCAGAAGGTAGCGC
-CACAGCAGGGGG---
 T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:SCTCAGAAGGTAGCGC
DCHCAGCAGGRGGCC-
 T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:SCTCAGAAGGTAGCGC
----NGAAGC------
 T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:SCTCAGAAGGTAGCGC
DCTCAGCAGG------
 T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:SCTCAGAAGGTAGCGC-----
-GCCASCAGGGGGCGCYVNNG
 T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--SCTCAGAAGGTAGCGC
CCACACAGCAGGAGA---
 A C G T A C G T T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:SCTCAGAAGGTAGCGC
--GGAGAAAGGTGCGA
 T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C
A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-SCTCAGAAGGTAGCGC--
TGGCCACCAGGGGGCGCTA
 A C G T T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--SCTCAGAAGGTAGCGC
CCACACAGCAGGAGA---
 A C G T A C G T T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--SCTCAGAAGGTAGCGC
TTCCKNAGAA--------
 A C G T A C G T T A C G T A G C G A C T A T G C C G T A A C T G C T G A C G T A C T A G A C T G C A G T T C G A C T A G A T G C A C T G A T G C
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T