Information for 3-CYRRAGGGCTSMGARG (Motif 21)

A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G
Reverse Opposite:
A G T C A G T C A G C T A G T C A C G T A T G C C G T A A C T G A G T C A T G C A G T C A C G T A G C T A G T C C T G A A C T G
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.841
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 39.5bp
Average Position of motif in Background51.5 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CYRRAGGGCTSMGARG
TCACCTCTGGGCAG-----
 A C G T A C G T A C G T A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CYRRAGGGCTSMGARG
------NGCTN-----
 A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CYRRAGGGCTSMGARG
CCGCCCAAGGGCAG-----
 A C G T A C G T A C G T A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CYRRAGGGCTSMGARG
TGCCCTNAGGGCA------
 A C G T A C G T A C G T A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CYRRAGGGCTSMGARG
----AGGCCTNG----
 A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CYRRAGGGCTSMGARG
TGCCCNNAGGGCA------
 A C G T A C G T A C G T A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CYRRAGGGCTSMGARG---
----AGGGGTCAGAGGTCA
 A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CYRRAGGGCTSMGARG
TGCCCTNAGGGCA------
 A C G T A C G T A C G T A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CYRRAGGGCTSMGARG
-------GCTCCG---
 A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CYRRAGGGCTSMGARG
CGAACAGTGCTCACTAT
 A C G T A G T C A G C T C T A G T C G A G T C A A C T G A T C G A C T G A G T C A C G T A T C G T G C A A C T G C T G A C T A G A C T G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T