Information for 15-CGYTTTCAAACAS (Motif 20)

T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G
Reverse Opposite:
A T G C A C G T A C T G A C G T A G C T A C G T A C T G C G T A C G T A C G T A C T G A A G T C A T C G
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.851
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.0 +/- 23.7bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGYTTTCAAACAS
CGGTTTCAAA---
 T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGYTTTCAAACAS
TGGTTTCAGT---
 T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGYTTTCAAACAS
-NCTGTCAATCAN
 T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGYTTTCAAACAS
GSCTGTCACTCA-
 T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGYTTTCAAACAS
-SCTGTCAVTCAV
 T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGYTTTCAAACAS
-GCTGTCAA----
 T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGYTTTCAAACAS
--NATTCAAAT--
 T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGYTTTCAAACAS----
NNTTTTCACACCTTNNN
 T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGYTTTCAAACAS
AACTAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGYTTTCAAACAS
-CCTGTCAA----
 T A G C A C T G A G C T A C G T A C G T A C G T A G T C C G T A C T G A G T C A A G T C G T C A A T C G
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T