p-value: | 1e-9 |
log p-value: | -2.203e+01 |
Information Content per bp: | 1.838 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.75% |
Number of Background Sequences with motif | 7.7 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 47.6 +/- 22.6bp |
Average Position of motif in Background | 45.9 +/- 21.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.14 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAAGTTCTTGTDC TTAAGTGCTT---- |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAAGTTCTTGTDC TTAAGTGGN----- |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAAGTTCTTGTDC TTAAGTGGT----- |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TAAGTTCTTGTDC NTNNTTAAGTGGTTANN- |
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ISL2/MA0914.1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAAGTTCTTGTDC TTAAGTGC------ |
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PB0058.1_Sfpi1_1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TAAGTTCTTGTDC- NNACTTCCTCTTNN |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TAAGTTCTTGTDC NTNNTTAAGTGGNTNAN- |
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PB0037.1_Isgf3g_1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TAAGTTCTTGTDC-- TNAGTTTCGATTTTN |
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PH0005.1_Barhl1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TAAGTTCTTGTDC GNNTTAATTGGTTGTT- |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TAAGTTCTTGTDC NATTTAAGTACTTANNA |
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