Information for 9-CTCCCCGTGA (Motif 17)

G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C A C T G A C T G A C T G A C T G C G T A A C T G
p-value:1e-9
log p-value:-2.237e+01
Information Content per bp:1.885
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif24.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.7 +/- 14.6bp
Average Position of motif in Background49.5 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CTCCCCGTGA--
--NCACGTGACN
 G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A A C G T A C G T
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTCCCCGTGA--
--NCACGTGACN
 G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A A C G T A C G T
A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTCCCCGTGA-
-KCCACGTGAC
 G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A A C G T
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTCCCCGTGA
-TCCCCA---
 G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTCCCCGTGA---
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

TFE3/MA0831.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTCCCCGTGA-
-ATCACGTGAC
 G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A A C G T
A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTCCCCGTGA--
----NCGTGACN
 G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Id2/MA0617.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTCCCCGTGA
--GCACGTGA
 G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A
A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTCCCCGTGA--
--TCACGTGACC
 G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A A C G T A C G T
A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTCCCCGTGA
-NCCACGTG-
 G T A C C G A T T A G C A G T C A G T C A G T C A C T G A C G T C T A G C G T A
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T