Information for 9-AAGTGGBAAGGCA (Motif 12)

G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
Reverse Opposite:
C G A T A C T G A T G C A G T C C G A T A G C T T A C G A G T C A G T C G T C A A G T C A C G T A C G T
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.845
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.2 +/- 20.5bp
Average Position of motif in Background47.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGBAAGGCA
NTCAAGTGGN------
 A C G T A C G T A C G T G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGGBAAGGCA
TTAAGTGGT------
 A C G T A C G T G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGGBAAGGCA
TTAAGTGGN------
 A C G T A C G T G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGBAAGGCA
NTCAAGTGG-------
 A C G T A C G T A C G T G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGTGGBAAGGCA
TTRAGTGSYK-----
 A C G T A C G T G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGBAAGGCA
NTNNTTAAGTGGTTANN--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGBAAGGCA
NTNNTTAAGTGGNTNAN--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------AAGTGGBAAGGCA
NANTTTCAAGTGGTTAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGBAAGGCA
AAATTCAAGTGGNTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGBAAGGCA
CTYRAGTGSY------
 A C G T A C G T A C G T G T C A C G T A A C T G A C G T A C T G A C T G A G T C C T G A C G T A A C T G A T C G A G T C C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T