Information for 14-ATKGYTTGAATTW (Motif 18)

C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T
Reverse Opposite:
G C T A C G T A C G T A A C G T A C G T T G A C G T C A G T C A C T G A G T A C T G A C C G T A C G A T
p-value:1e-10
log p-value:-2.347e+01
Information Content per bp:1.704
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.8 +/- 30.0bp
Average Position of motif in Background65.5 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:ATKGYTTGAATTW-
-----TTGACTTTT
 C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATKGYTTGAATTW---
NNNTATTGAATTGNNN
 C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ATKGYTTGAATTW
---ATTTGAATT-
 C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATKGYTTGAATTW-----
-NNTTTTTAATTAATTCG
 C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

mix-a/MA0621.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:ATKGYTTGAATTW--
----AATTAATTAGT
 C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATKGYTTGAATTW-----
-AGTTTTTAATTAATTTG
 C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PB0171.1_Sox18_2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATKGYTTGAATTW-----
--NNNNTGAATTCANNNC
 C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PH0095.1_Lhx5/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATKGYTTGAATTW-----
-ANNATTTAATTAATTNN
 C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

LMX1A/MA0702.1/Jaspar

Match Rank:9
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:ATKGYTTGAATTW-
------TTAATTAA
 C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A

PH0091.1_Lhx1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATKGYTTGAATTW-----
-NNTTATTAATTAATNCN
 C G T A C G A T A C T G C A T G A G C T A C G T A C G T A C T G C G T A T C G A C G A T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G