Information for 8-AAAGTGGCAAGGC (Motif 11)

C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G A T A G C T A C T G A G T C A G T C G C T A A G T C A G C T A G C T G A C T
p-value:1e-11
log p-value:-2.624e+01
Information Content per bp:1.806
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.9 +/- 18.8bp
Average Position of motif in Background55.6 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF13/MA0657.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AAAGTGGCAAGGC--
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

SP4/MA0685.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGGCAAGGC---
NAAGGGGGCGTGGCTTN
 A C G T C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C A C G T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAAGTGGCAAGGC-
--GGGGGCGGGGCC
 C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C A C G T
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF14/MA0740.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAAGTGGCAAGGC-
AAGGGGGCGTGGCC
 C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C A C G T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAAGTGGCAAGGC
---TTGCCAAG--
 C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.57
Offset:7
Orientation:forward strand
Alignment:AAAGTGGCAAGGC----
-------CAAGGHCANV
 C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGGCAAGGC
TTAAGTGGN-----
 A C G T C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGGCAAGGC---
NAGANTGGCGGGGNGNA
 A C G T C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGGCAAGGC
TTAAGTGGT-----
 A C G T C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAAGTGGCAAGGC--
-AGGGGGCGGGGCTG
 C T G A C T G A C T G A A C T G C G A T A C T G T C A G A G T C C T G A C G T A A C T G C T A G A G T C A C G T A C G T
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G