Information for 5-TGTCGATTGG (Motif 5)

A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A G T C A A C G T G A T C T C A G G T C A A G T C C G T A
p-value:1e-12
log p-value:-2.797e+01
Information Content per bp:1.867
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif21.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.9 +/- 25.9bp
Average Position of motif in Background49.5 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGTCGATTGG-
TGTGGATTNNN
 A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGTCGATTGG
NNTGTGGATTSS
 A C G T A C G T A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGTCGATTGG--
--CCGATTGGCT
 A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGTCGATTGG----
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGTCGATTGG----
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGTCGATTGG-----
---TGATTGGCTANN
 A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGTCGATTGG----
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTCGATTGG----
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGTCGATTGG-
-BTBRAGTGSN
 A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTCGATTGG
--TTGATTGN
 A C G T A C T G A C G T A G T C C A T G C G T A A C G T A C G T A C T G A C T G
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G