Information for 10-CTGCCAATCA (Motif 14)

T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A
Reverse Opposite:
G A C T A C T G G T C A C G A T A C G T T C A G C A T G T A G C C G T A A C T G
p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.654
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif1327.5
Percentage of Background Sequences with motif2.81%
Average Position of motif in Targets46.7 +/- 26.1bp
Average Position of motif in Background50.1 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAATCA-
SCTGTCAVTCAV
 A C G T T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAATCA-
NCTGTCAATCAN
 A C G T T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CTGCCAATCA
GSCTGTCACTCA
 A C G T A C G T T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CTGCCAATCA-
---CCAATCAA
 T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CTGCCAATCA
ACTAGCCAATCA
 A C G T A C G T T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CTGCCAATCA-
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGCCAATCA
-TGCCAA---
 T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAATCA
GGTGCCAAGT-
 A C G T T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTGCCAATCA-
-AGCCAATCGG
 T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A A C G T
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAATCA
CGTGCCAAG--
 A C G T T G A C G C A T A T C G G T A C A G T C T G C A G C T A C A G T T G A C C T G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T