Information for 9-CCTTATATGG (Motif 12)

A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G A T C G T A C G A T C G T A C T G A A C T G A C T G
p-value:1e-10
log p-value:-2.377e+01
Information Content per bp:1.878
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif23.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.4 +/- 14.7bp
Average Position of motif in Background53.2 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CCTTATATGG--
CCATATATGGNA
 A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G A C G T A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--CCTTATATGG--
TNCCATATATGGNA
 A C G T A C G T A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G A C G T A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

SRF/MA0083.3/Jaspar

Match Rank:3
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---CCTTATATGG---
TGNCCATATATGGTCA
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CCTTATATGG
CCATATATGG
 A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CCTTATATGG--
CCTTTTATAGNC
 A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0184.1_Tbp_2/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CCTTATATGG-
GNNCGCTTAAATCGG
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G A C G T
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCTTATATGG
NCCTTATCTG-
 A C G T A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCTTATATGG
AACCTTATAT--
 A C G T A C G T A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCTTATATGG---
--TTTTATGGCTN
 A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTTATATGG
NNCTTATCTN-
 A C G T A G T C A G T C A G C T A C G T C G T A C G A T C G T A C G A T A C T G A C T G
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T