Information for 6-CGCAGCCTSGGASRGA (Motif 9)

A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T A T G C A G C T A T G C A G T C A T G C C G T A A C T G A T C G G T A C A G C T A C T G A T G C A T C G
p-value:1e-11
log p-value:-2.619e+01
Information Content per bp:1.799
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 23.5bp
Average Position of motif in Background41.1 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCAGCCTSGGASRGA
RGSMTBCTGGGAAAT-
 A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CGCAGCCTSGGASRGA---
--------GGGCGGGAAGG
 A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGCAGCCTSGGASRGA
---NGCCTGAGGCN--
 A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGCAGCCTSGGASRGA
---TGCCTGAGGCN--
 A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CGCAGCCTSGGASRGA--
------BTKGGCGGGAAA
 A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CGCAGCCTSGGASRGA
---NGCCTNAGGCN--
 A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CGCAGCCTSGGASRGA
-----CCAGGAACAG-
 A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CGCAGCCTSGGASRGA
-BCAGACWA-------
 A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.48
Offset:9
Orientation:forward strand
Alignment:CGCAGCCTSGGASRGA---
---------GGCGGGAARN
 A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGCCTSGGASRGA
TCNCCTGCTGNGNNN--
 A C G T A T G C A T C G A G T C C T G A C A T G A T G C A G T C C G A T A T C G A C T G A T C G C T G A A T C G C T G A A C T G C G T A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T