Information for 9-AGTCACGCTC (Motif 5)

C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C
Reverse Opposite:
T A C G T G C A T A C G T A G C T C A G C A G T A T C G C G T A A G T C G A C T
p-value:1e-15
log p-value:-3.490e+01
Information Content per bp:1.514
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif9.83%
Number of Background Sequences with motif1778.3
Percentage of Background Sequences with motif3.77%
Average Position of motif in Targets50.8 +/- 28.4bp
Average Position of motif in Background50.0 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGTCACGCTC
AGTCACGC--
 C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AGTCACGCTC-----
-GTCACGCTCNCTGA
 C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGTCACGCTC
---CACGCA-
 C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTCACGCTC----
NNAGTCCCACTCNNNN
 A C G T A C G T C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

KLF14/MA0740.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGTCACGCTC----
GGCCACGCCCCCTT
 C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C A C G T A C G T A C G T A C G T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

SP4/MA0685.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGTCACGCTC-----
TAAGCCACGCCCCCTTT
 A C G T A C G T C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGTCACGCTC
GGTCCCGCCC
 C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

FOSL2/MA0478.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGTCACGCTC
NTGAGTCATCN--
 A C G T A C G T A C G T C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTCACGCTC--
GGCCACRCCCMK
 C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C A C G T A C G T
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTCACGCTC------
NGTCACGCTTGGCTGC
 C T G A T C A G G C A T T A G C G T C A A G T C A T C G A T G C A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C