Information for 10-RTGCGCATGCGCVBBG (Motif 18)

C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
Reverse Opposite:
A G T C T A C G T G A C A G T C A C T G G T A C C T A G A G T C T G C A A C G T A C T G A G T C A C T G A G T C C T G A G A T C
p-value:1e-8
log p-value:-1.850e+01
Information Content per bp:1.725
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif188.2
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets49.2 +/- 24.7bp
Average Position of motif in Background45.7 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:RTGCGCATGCGCVBBG
-TGCGCAGGCGC----
 C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:forward strand
Alignment:RTGCGCATGCGCVBBG
CTGCGCATGCGC----
 C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:RTGCGCATGCGCVBBG
GTGCGCATGCGC----
 C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--RTGCGCATGCGCVBBG
NCANGCGCGCGCGCCA--
 A C G T A C G T C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-RTGCGCATGCGCVBBG
ANTGCGTGGGCGTNN--
 A C G T C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RTGCGCATGCGCVBBG
-TGCGTGGGCGT----
 C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---RTGCGCATGCGCVBBG
NNTTTGCACACGGCCC---
 A C G T A C G T A C G T C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:RTGCGCATGCGCVBBG
--SDGCAGGTGCNS--
 C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

EGR4/MA0733.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--RTGCGCATGCGCVBBG
AANTGCGTGGGCGTNN--
 A C G T A C G T C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:RTGCGCATGCGCVBBG
---GGCACGCGTC---
 C T A G A G C T A C T G A G T C A C T G A G T C T G C A A C G T A C T G A G T C A C T G A G T C T C A G A C T G A G T C T C A G
A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T