Information for 9-AAAAAGCCAGTCA (Motif 13)

C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G G T C A A G T C A C G T A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T
p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.908
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.6 +/- 28.9bp
Average Position of motif in Background75.1 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAAAAGCCAGTCA
-ACTAGCCAATCA
 C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAAAAGCCAGTCA-----
-CAAATCCAGACATCACA
 C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAAAAGCCAGTCA
---ATGCCAGACN
 C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAAAAGCCAGTCA---
NNNNTGCCAGTGATTG
 C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAAAGCCAGTCA--
NWTAAYCYAATCAWN
 C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A A C G T A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAAAGCCAGTCA----
-AAGCACCTGTCAATAT
 C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AAAAAGCCAGTCA-
----AGCCAATCGG
 C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAAAGCCAGTCA-
AAATGGACCAATCAG
 A C G T C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAAAAGCCAGTCA-
--SCTGTCAVTCAV
 C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAAAAGCCAGTCA
-AAAAGTCAA---
 C T G A C G T A C G T A C G T A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A T G C C G T A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T