Information for 8-GCGTGCGAGGACC (Motif 11)

A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A G T C A C G T A T G C C T A G G T A C C G T A A T G C A T C G A G T C
p-value:1e-11
log p-value:-2.618e+01
Information Content per bp:1.793
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif42.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.9 +/- 27.0bp
Average Position of motif in Background48.5 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGCGAGGACC
TTGCGTGCVA-----
 A C G T A C G T A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCGAGGACC
TGCGTG--------
 A C G T A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCGTGCGAGGACC
-CGTGGGTGGTCC
 A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCGAGGACC
NGCGTGGGCGGR--
 A C G T A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGCGAGGACC
TGCGTGGGCGT---
 A C G T A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCGTGCGAGGACC----
--GGGCGATGACCAYTC
 A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

EGR4/MA0733.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCGTGCGAGGACC
AANTGCGTGGGCGTNN-
 A C G T A C G T A C G T A C G T A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCGAGGACC
TGCGTGGGYG----
 A C G T A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGCGAGGACC
ANTGCGTGGGCGTNN-
 A C G T A C G T A C G T A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGCGAGGACC
ANTGCGGGGGCGGN--
 A C G T A C G T A C G T A C T G A T G C A T C G G A C T A C T G G A T C A T C G T G C A A C T G A C T G T C G A A G T C A G T C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T