Information for 1-GTGACAGAGCTGT (Motif 3)

A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T
Reverse Opposite:
C G T A A G T C C G T A A C T G A G T C C G A T A G T C A G C T T A C G G A C T A G T C G T C A T A G C
p-value:1e-15
log p-value:-3.465e+01
Information Content per bp:1.771
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.7 +/- 28.8bp
Average Position of motif in Background50.7 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GTGACAGAGCTGT--
-----ACAGCTGTTV
 A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:GTGACAGAGCTGT-
------CAGCTGTT
 A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTGACAGAGCTGT
---NNACAGCTGC
 A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T
A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTGACAGAGCTGT
---NAHCAGCTGD
 A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T
A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GTGACAGAGCTGT--
-----CCAGCTGTTN
 A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GTGACAGAGCTGT--
-----ACAGCTGTTN
 A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GTGACAGAGCTGT--
-----NCAGCTGCTG
 A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTGACAGAGCTGT-
--NNAGCAGCTGCT
 A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T A C G T
A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTGACAGAGCTGT-
---NNGCAGCTGTT
 A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T A C G T
A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

MSC/MA0665.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTGACAGAGCTGT-
----AACAGCTGTT
 A C T G A C G T C T A G C G T A A T G C T C G A T A C G C G T A A C T G G T A C C G A T A C T G G A C T A C G T
A C G T A C G T A C G T A C G T C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T