Information for 11-ACTGTGTCTATGA (Motif 14)

T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A
Reverse Opposite:
A C G T A G T C G T C A A C G T C T G A A T C G T G C A A G T C C G T A A G T C C T G A A C T G A G C T
p-value:1e-5
log p-value:-1.324e+01
Information Content per bp:1.681
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif56.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets48.1 +/- 27.7bp
Average Position of motif in Background49.3 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACTGTGTCTATGA
-CTGTTGCTAGGS
 T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACTGTGTCTATGA--
NNNGTAACTANGNNA
 T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ACTGTGTCTATGA-
----TGACCTTGAN
 T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ACTGTGTCTATGA-
----TGACCTTGAV
 T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ACTGTGTCTATGA---
----TGACCTTGACCT
 T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:forward strand
Alignment:ACTGTGTCTATGA-
--------CATGAC
 T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTGTCTATGA--
NTNNCGTATCCAAGTNN
 A C G T A C G T T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACTGTGTCTATGA
AATGTATCAAT--
 T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ACTGTGTCTATGA------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACTGTGTCTATGA
--BNTGDCCTTG-
 T C G A G T A C A G C T C T A G G C A T T A C G A C G T A T G C G A C T T G C A A C G T A C T G G T C A
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T