Information for 12-TTGCCACTTT (Motif 26)

G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T
Reverse Opposite:
C G T A C T G A G T C A C T A G A C G T C T A G A T C G A G T C C G T A C G T A
p-value:1e-7
log p-value:-1.635e+01
Information Content per bp:1.767
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif235.4
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets50.1 +/- 30.5bp
Average Position of motif in Background49.2 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTGCCACTTT---
CCTTGCAATTTTTNN
 A C G T A C G T G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCACTTT
CTTGGCAA---
 A C G T G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCACTTT-
GCNGCCATCTTG
 A C G T G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGCCACTTT
NNTTGGCANN--
 A C G T A C G T G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTGCCACTTT
-TGTCANYT-
 G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCACTTT
NTTGGCANN--
 A C G T G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGCCACTTT----
ATGCCACGTCATCA
 G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTGCCACTTT-
--ACCACTTAA
 G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T A C G T
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTGCCACTTT----
TNNTGCTACTGTNNNN
 A C G T A C G T G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGCCACTTT-
-TGGCAGTTGN
 G C A T C G A T A C T G T A G C A G T C G T C A A G T C A C G T A G C T A C G T A C G T
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G