Information for 15-GTCCDGTTGAGCC (Motif 22)

C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C
Reverse Opposite:
A C T G C T A G A G T C A C G T A G T C C G T A C T G A A G T C G C T A A C T G A C T G C G T A A G T C
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.7 +/- 31.8bp
Average Position of motif in Background56.9 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTCCDGTTGAGCC-
NNTCCTGCTGTGNNN
 A C G T C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCCDGTTGAGCC-
TNTCCTGCTGTGNNG
 A C G T C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCCDGTTGAGCC
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTCCDGTTGAGCC
--CCTGCTGAGH-
 C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTCCDGTTGAGCC-
TCNCCTGCTGNGNNN
 A C G T C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCCDGTTGAGCC
CCCCCTGCTGTG--
 A C G T C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCCDGTTGAGCC
---CAGGTGAGG-
 C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GTCCDGTTGAGCC-
------ATAATCCC
 C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCCDGTTGAGCC
ACATCCTGNT-----
 A C G T A C G T C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTCCDGTTGAGCC------
--NNANTTGACCCCTNNNN
 C T A G A C G T G T A C G T A C C A G T A C T G A G C T A C G T A C T G T G C A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G