Information for 7-CCTTGGTGCC (Motif 17)

T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C
Reverse Opposite:
C T A G T C A G G T A C C G T A G T A C G T A C G T C A C T G A A C T G A C T G
p-value:1e-10
log p-value:-2.337e+01
Information Content per bp:1.540
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif291.5
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets51.7 +/- 26.1bp
Average Position of motif in Background52.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTTGGTGCC
CCTTTGTT--
 T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTTGGTGCC
YCTTTGTTCC
 T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTTGGTGCC
CCWTTGTYYB
 T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTTGGTGCC
CCTTTGTTTT
 T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGGTGCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGGTGCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGGTGCC
BNTGDCCTTG-----
 A C G T A C G T A C G T A C G T A C G T T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTTGGTGCC
CCWTTGTY--
 T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGGTGCC-
CCACCTGTTGCAT
 A C G T A C G T T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCTTGGTGCC
-CTTTGT---
 T G A C T G A C G A C T C A G T C A T G C A T G G C A T C A T G A G T C G A T C
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T