Information for 8-AGCCTGACCTCTGTCA (Motif 13)

C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T C T A G C G T A A G T C C G T A A T C G C G T A A C T G A C T G A G C T A G T C G T C A T C A G A C T G A T G C A C G T
p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 18.8bp
Average Position of motif in Background44.4 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TGIF2/MA0797.1/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AGCCTGACCTCTGTCA
----TGACAGCTGTCA
 C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AGCCTGACCTCTGTCA
----TGACACCTGTCA
 C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AGCCTGACCTCTGTCA
----TGACACCTGTCA
 C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AGCCTGACCTCTGTCA
----TGACAGCTGTCA
 C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AGCCTGACCTCTGTCA
---CTGACCTTTG---
 C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGCCTGACCTCTGTCA
-GYCTGGYYTNTGTCA
 C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A
A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AGCCTGACCTCTGTCA
----TGACCYCT----
 C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCCTGACCTCTGTCA
CNNTTGACCTTTG---
 C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGCCTGACCTCTGTCA--
----TGACCTTTGCCCTA
 C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGCCTGACCTCTGTCA
----TGACCTYA----
 C G T A A T C G G T A C A G T C A C G T A C T G C T G A A G T C A G T C C G A T A T G C A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T