| p-value: | 1e-11 |
| log p-value: | -2.578e+01 |
| Information Content per bp: | 1.830 |
| Number of Target Sequences with motif | 22.0 |
| Percentage of Target Sequences with motif | 2.46% |
| Number of Background Sequences with motif | 168.0 |
| Percentage of Background Sequences with motif | 0.37% |
| Average Position of motif in Targets | 41.8 +/- 24.9bp |
| Average Position of motif in Background | 45.5 +/- 32.9bp |
| Strand Bias (log2 ratio + to - strand density) | 0.8 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
Sox2/MA0143.3/Jaspar
| Match Rank: | 1 |
| Score: | 0.83
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AACAAAGGCT
AACAAAGG-- |
|
|
|
PB0061.1_Sox11_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.81
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----AACAAAGGCT--
ATAAGAACAAAGGACTA |
|
|
|
Sox3/MA0514.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.81
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AACAAAGGCT
AAAACAAAGG-- |
|
|
|
PB0071.1_Sox4_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.81
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----AACAAAGGCT--
AGAAGAACAAAGGACTA |
|
|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
| Match Rank: | 5 |
| Score: | 0.80
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AACAAAGGCT
RACAAWGG-- |
|
|
|
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
| Match Rank: | 6 |
| Score: | 0.80
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AACAAAGGCT
GGAACAAAGR-- |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 7 |
| Score: | 0.78
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -AACAAAGGCT
GAACAATGGN- |
|
|
|
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
| Match Rank: | 8 |
| Score: | 0.77
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AACAAAGGCT
VRRACAAWGG-- |
|
|
|
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
| Match Rank: | 9 |
| Score: | 0.74
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -AACAAAGGCT
RAACAATGGN- |
|
|
|
Sox6/MA0515.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.73
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AACAAAGGCT
AAAACAATGG-- |
|
|
|
