Information for 6-TCTGCGGCCG (Motif 3)

A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G
Reverse Opposite:
A G T C A C T G A C T G A G T C G T A C A T C G A G T C C G T A A C T G C G T A
p-value:1e-14
log p-value:-3.237e+01
Information Content per bp:1.890
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.11%
Number of Background Sequences with motif199.8
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets49.5 +/- 25.4bp
Average Position of motif in Background50.7 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCGGCCG
VBSYGTCTGG-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCGGCCG----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCGGCCG----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCTGCGGCCG
CTGTCTGG-----
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTGCGGCCG
TGTCAGGGGGCG
 A C G T A C G T A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTGCGGCCG--
TTTGGCGCCAAA
 A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCGGCCG
RGTTAGTGCCCY
 A C G T A C G T A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCTGCGGCCG--
--TGGGGCCCAC
 A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G A C G T A C G T
A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGCGGCCG
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCGGCCG
DTTTCCCGCC-
 A C G T A C G T G T A C A C G T A C T G A T G C A C T G A C T G A G T C A G T C C T A G
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T