Information for 8-CTCCCCAAATBCAGAT (Motif 9)

G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T
Reverse Opposite:
C T G A A C G T A T G C A C G T C T A G T A C G G C T A A G C T A C G T A C G T A T C G C T A G A C T G A T C G C G T A A C T G
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.808
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.6 +/- 16.2bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTCCCCAAATBCAGAT
----TCCAATCCACA-
 G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T
A C G T A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTCCCCAAATBCAGAT
---CACTAATT-----
 G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T
A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTCCCCAAATBCAGAT-
-----SSAATCCACANN
 G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCCCCAAATBCAGAT
-TCCCCA---------
 G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCCCCAAATBCAGAT-
-NNNNTGAATTCANNNC
 G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T A C G T
A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTCCCCAAATBCAGAT
AAGCCCCCCAAAAAT----
 A C G T A C G T A C G T G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T A C G T A C G T A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCCAAATBCAGAT
GGTTCCNNAATTTG----
 A C G T A C G T G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CTCCCCAAATBCAGAT
AAACCTCGTAAAATTT----
 A C G T A C G T A C G T A C G T G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CTCCCCAAATBCAGAT---
------ATATGCAAATNNN
 G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTCCCCAAATBCAGAT
GCTCGTAAAAA------
 A C G T G T A C A C G T A T G C A G T C A G T C A T G C C G T A C G T A C T G A C A G T A G T C A G T C C G T A A T C G T G C A A G C T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T