Information for 3-GGGGGCGCTGTTG (Motif 2)

C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G
Reverse Opposite:
G T A C G T C A T C G A A T G C C T G A A T C G A G T C A C T G G T A C A G T C A G T C A G T C G A T C
p-value:1e-46
log p-value:-1.065e+02
Information Content per bp:1.709
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif7.71%
Number of Background Sequences with motif285.3
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets52.0 +/- 21.5bp
Average Position of motif in Background53.5 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGGGGCGCTGTTG-
TTGGGGGCGCCCCTAG
 A C G T A C G T C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCGCTGTTG
NNNAAGGGGGCGGGNNN-
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCGCTGTTG
AGGGGGCGGGGCTG
 A C G T C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCGCTGTTG
ANTGCGGGGGCGGN----
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCGCTGTTG
RGKGGGCGGAGC--
 A C G T C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGCGCTGTTG-
NNAGGGGCGGGGTNNA
 A C G T A C G T C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GGGGGCGCTGTTG
---GGCGCGCT--
 C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGGCGCTGTTG
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCGCTGTTG
RGKGGGCGKGGC--
 A C G T C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGGGCGCTGTTG
GGGGGCGGGGC--
 C T A G C T A G C T A G A C T G A C T G G T A C A C T G A T G C A G C T T A C G A G C T C A G T A C T G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T