Information for 9-TGAATTGCAATTC (Motif 13)

C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C
Reverse Opposite:
A C T G C G T A G T C A A C G T A G C T C A T G G T A C C T G A C G T A A C G T A C G T G T A C C G T A
p-value:1e-7
log p-value:-1.725e+01
Information Content per bp:1.806
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 21.5bp
Average Position of motif in Background48.4 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TGAATTGCAATTC
NNNTATTGAATTGNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGAATTGCAATTC--
GCTAATTATAATTATC
 A C G T C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAATTGCAATTC--
TTGAATGAAATTCGA
 C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PH0063.1_Hoxb8/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGAATTGCAATTC
TTTATTAATTGCNNGN-
 A C G T A C G T A C G T A C G T C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGAATTGCAATTC
GGAAGTGAAAST-
 C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAATTGCAATTC--
TTTAATTATAATTAAG
 A C G T C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

Nkx2-5/MA0063.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAATTGCAATTC
TTAATTG------
 C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C
C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAATTGCAATTC
NTAATTGN-----
 C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAATTGCAATTC
NTAATTGG-----
 C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAATTGCAATTC--
TATAATTATAATATTC
 A C G T C G A T A C T G C G T A C G T A A C G T A G C T A C T G G A T C C T G A C G T A A C G T A C G T T A G C A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C