Information for 6-ATGGCACTGT (Motif 9)

C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T
Reverse Opposite:
C T G A T A G C C T G A A T C G C G A T A C T G T A G C T A G C C G T A C G A T
p-value:1e-10
log p-value:-2.490e+01
Information Content per bp:1.829
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif82.7
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets51.5 +/- 27.1bp
Average Position of motif in Background50.7 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATGGCACTGT------
AATCGCACTGCATTCCG
 A C G T C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCACTGT
NNTTGGCANN--
 A C G T A C G T C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCACTGT
NTTGGCANN--
 A C G T C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCACTGT
GGTTGGCAT---
 A C G T A C G T C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATGGCACTGT-
AACAATGGTAGTGTT
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T A C G T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCACTGT
CTTGGCAA---
 A C G T C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATGGCACTGT-
AACAATAACATTGTT
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

SOX4/MA0867.1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ATGGCACTGT-
GAACAATTGCAGTGTT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATGGCACTGT
TTGGCA----
 C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATGGCACTGT
GGGATTGCATNN-
 A C G T A C G T A C G T C G T A A C G T A C T G A T C G A G T C C G T A A T G C A G C T A T C G A G C T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T