Information for 4-CCTGCTKGAGAAATGT (Motif 5)

T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T
Reverse Opposite:
T C G A A T G C G T C A A C G T A C G T G C A T A G T C A G C T G A T C G T C A C T G A C T A G G T A C G C T A A C T G A C T G
p-value:1e-12
log p-value:-2.836e+01
Information Content per bp:1.774
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.4 +/- 21.5bp
Average Position of motif in Background44.9 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTGCTKGAGAAATGT
--TTCTNNAGAANT--
 T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T
A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTGCTKGAGAAATGT
CATTTCCTGAGAAAT--
 A C G T T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTKGAGAAATGT
CCCCCTGCTGTG-------
 A C G T A C G T A C G T T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCTGCTKGAGAAATGT
--TTCCKNAGAA----
 T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T
A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CCTGCTKGAGAAATGT----
------GGAGAAAGGTGCGA
 T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCTGCTKGAGAAATGT
ANCAGCTG---------
 A C G T T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CCTGCTKGAGAAATGT-
-------NTGGAATGTG
 T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCTGCTKGAGAAATGT
---NATTGTGCAAT--
 T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T
A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CCTGCTKGAGAAATGT
----CSTGGGAAAD--
 T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCTKGAGAAATGT
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T C A T G A G T C A G C T A C G T C A T G C T G A A C T G C G T A T C G A C G T A A C G T T A C G A G C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T