Information for 7-AGTTGGCAGATGC (Motif 10)

C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C
Reverse Opposite:
A C T G A G T C T G C A C G A T A G T C A C G T A C T G A G T C G T A C C G T A T C G A A G T C A C G T
p-value:1e-10
log p-value:-2.404e+01
Information Content per bp:1.802
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.3 +/- 20.8bp
Average Position of motif in Background44.5 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AGTTGGCAGATGC
---TGGCAGTTGN
 C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

PH0141.1_Pknox2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGTTGGCAGATGC--
NNATTGACAGGTGCTT
 A C G T C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGTTGGCAGATGC-
--NNVVCAGCTGBN
 C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C A C G T
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGTTGGCAGATGC
ARNTGACA-----
 C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGTTGGCAGATGC
-CTTGGCAA----
 C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:AGTTGGCAGATGC--
----GACAGCTGCAG
 C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGTTGGCAGATGC-----
-CTCAGCAGCTGCTACTG
 C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGTTGGCAGATGC-
----CGCAGCTGCG
 C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTTGGCAGATGC
-VBTGWCAGCB--
 C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGTTGGCAGATGC
---TGGCAGTTGG
 C G T A C T A G A G C T A C G T A C T G T C A G A G T C C G T A A C T G G C T A A C G T C T A G A G T C
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G