Information for 12-CCATTGCATG (Motif 46)

A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.147e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.3 +/- 16.2bp
Average Position of motif in Background21.5 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCATTGCATG-----
CCATTGTATGCAAAT
 A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCATTGCATG-
GGGATTGCATNN
 A C G T A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCATTGCATG---
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCATTGCATG--
--ATTGCATCAK
 A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCATTGCATG
CCATTGTTYB
 A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCATTGCATG---
---TTGCGTGCVA
 A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCATTGCATG-
--ATTGCATAA
 A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T
A C G T A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCATTGCATG--
--ATTGCATCAT
 A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCATTGCATG--
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCATTGCATG--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G