Information for 23-ASAAGGCAAGGWR (Motif 45)

C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G
Reverse Opposite:
A G C T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A T C G A C G T
p-value:1e-5
log p-value:-1.220e+01
Information Content per bp:1.890
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets75.2 +/- 15.7bp
Average Position of motif in Background37.8 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ASAAGGCAAGGWR
--AAGGCAAGTGT
 C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ASAAGGCAAGGWR
AAAAGTCAA----
 C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ASAAGGCAAGGWR
-CAAGGHCANV--
 C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ASAAGGCAAGGWR-
--AGGTCAAGGTCA
 C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ASAAGGCAAGGWR------
--TATTCAAGGTCATGCGA
 C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ASAAGGCAAGGWR
ACAAAG-------
 C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ASAAGGCAAGGWR
--CAGGTAAGTAT
 C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G
A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ASAAGGCAAGGWR-
----BTCAAGGTCA
 C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ASAAGGCAAGGWR-
----NTCAAGGTCA
 C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ASAAGGCAAGGWR
AAGTTCAAGGTCAGC--
 A C G T A C G T A C G T A C G T C G T A T A G C C G T A C G T A C T A G A C T G A G T C C G T A C G T A A C T G A C T G C G A T T C A G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T