Information for 20-CTGGATGGCAGAA (Motif 40)

A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A T C G A G T C A G T C C G T A A C G T A G T C G T A C G T C A A C T G
p-value:1e-7
log p-value:-1.769e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 31.4bp
Average Position of motif in Background18.8 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGGATGGCAGAA-
NGTAGGTTGGCATNNN
 A C G T A C G T A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGGATGGCAGAA
--GGTTGGCAT--
 A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTGGATGGCAGAA-
----ATGCCAGACN
 A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTGGATGGCAGAA----
--CAATTGCAAAAATAT
 A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGGATGGCAGAA--
----ATTGCACAATA
 A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGGATGGCAGAA
--TNNGGGCAG--
 A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGGATGGCAGAA
CAAGATGGCGGC-
 A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGGATGGCAGAA---
-ARGAGGMCAAAATGW
 A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTGGATGGCAGAA
---CTTGGCAA--
 A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGGATGGCAGAA
CAAGATGGCGGC-
 A G T C A C G T A C T G A C T G C G T A C G A T A C T G A C T G A T G C C G T A A C T G C G T A C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T