Information for 3-AGCCAGGAACTSACCG (Motif 4)

C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
Reverse Opposite:
A G T C A C T G A C T G A G C T T A C G G C T A A C T G G C A T C G A T A T G C G T A C C G A T A C T G A T C G G T A C C G A T
p-value:1e-12
log p-value:-2.874e+01
Information Content per bp:1.679
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif49.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets56.5 +/- 25.9bp
Average Position of motif in Background56.8 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCCAGGAACTSACCG
-NACAGGAAAT-----
 C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCCAGGAACTSACCG
-ANCAGGATGT-----
 C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGCCAGGAACTSACCG
-----GGAAATTCCC-
 C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCCAGGAACTSACCG
--ACAGGAAGTG----
 C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGCCAGGAACTSACCG
-NACAGGAAAT-----
 C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAGGAACTSACCG
BCAGACWA----------
 A C G T A C G T C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGCCAGGAACTSACCG
--ACAGGAAGTG----
 C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AGCCAGGAACTSACCG
-----GGAAATCCCC-
 C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGCCAGGAACTSACCG
CGTGCCAAG---------
 A C G T A C G T C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AGCCAGGAACTSACCG
-----GGAAANCCCC-
 C G T A A C T G T A G C A G T C C G T A C A T G A T C G C G T A C G T A T G A C C G A T A T G C T C G A A G T C G T A C C T A G
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T