Information for 19-SYTGMSCTGGTCA (Motif 39)

A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A G T C C G T A A C T G A T C G A C G T A G T C C G T A C T A G A T C G
p-value:1e-7
log p-value:-1.769e+01
Information Content per bp:1.878
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 14.1bp
Average Position of motif in Background54.1 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:SYTGMSCTGGTCA----
-CGCGCCGGGTCACGTA
 A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.63
Offset:7
Orientation:forward strand
Alignment:SYTGMSCTGGTCA
-------AGGTCA
 A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SYTGMSCTGGTCA----
-GAGCCCTTGTCCCTAA
 A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:SYTGMSCTGGTCA
---WDNCTGGGCA
 A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:SYTGMSCTGGTCA
--TGACCTYA---
 A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:SYTGMSCTGGTCA--
---------GTCATN
 A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:SYTGMSCTGGTCA
-----AGRGGTCA
 A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:SYTGMSCTGGTCA
--TGACCTTGAT-
 A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:SYTGMSCTGGTCA
BNTGDCCTTG---
 A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:SYTGMSCTGGTCA-----
-GAAAACTAGTTAACATC
 A T G C A G T C A C G T A C T G G T C A A T G C A G T C C G A T A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C