Information for 9-GCTRCTAWTMCAK (Motif 21)

A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G
Reverse Opposite:
G T A C C G A T A C T G A C G T C G T A C G T A A C G T C G T A A C T G A G C T C T G A A C T G A G T C
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.866
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 17.7bp
Average Position of motif in Background34.7 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCTRCTAWTMCAK
---GCTAATCC--
 A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTRCTAWTMCAK
--TKCTGTTCCA-
 A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCTRCTAWTMCAK
---GCTAATCCCC
 A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCTRCTAWTMCAK
TNNTGCTACTGTNNNN-
 A C G T A C G T A C G T A C G T A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTRCTAWTMCAK----
---NNTAATCCNGNCNN
 A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTRCTAWTMCAK
---NYTAATCCYB
 A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTRCTAWTMCAK
---CTTAATCCC-
 A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G
A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCTRCTAWTMCAK
----TTAATCCC-
 A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCTRCTAWTMCAK
CNNNGCTACTGTANNN-
 A C G T A C G T A C G T A C G T A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCTRCTAWTMCAK
----YTAATCCY-
 A C T G A G T C A G C T C T G A A G T C A C G T C G T A C G A T A C G T G T C A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T