Information for 8-YSYTKATSASCAT (Motif 20)

A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T
Reverse Opposite:
C T G A A C G T A C T G A T C G A C G T A T C G C G T A A C G T G T C A C T G A C T A G A T C G C T A G
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.810
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.2 +/- 20.0bp
Average Position of motif in Background36.7 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:YSYTKATSASCAT-
--CTCATTTGCATW
 A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T A C G T
A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:YSYTKATSASCAT-
--BTVATTWGCATA
 A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T A C G T
A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---YSYTKATSASCAT-
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:YSYTKATSASCAT--
TAGTGATCATCATTA
 A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

POU1F1/MA0784.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:YSYTKATSASCAT---
--CTAATTTGCATATT
 A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

POU3F1/MA0786.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:YSYTKATSASCAT--
---TAATTTGCATAA
 A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T A C G T A C G T
A C G T A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:YSYTKATSASCAT--
---TAATTTGCATAA
 A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T A C G T A C G T
A C G T A C G T A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:YSYTKATSASCAT-
-----ATTTGCATA
 A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

PH0016.1_Cux1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---YSYTKATSASCAT-
ACCGGTTGATCACCTGA
 A C G T A C G T A C G T A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:YSYTKATSASCAT
-YCTTATCWVN--
 A G T C A T G C A G T C A G C T A C G T C G T A A C G T A T G C C G T A A T G C A G T C C G T A A G C T
A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C A C G T A C G T